Insertion junction: CLIP2.077761_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077761
Chromosome:chromosome 8
Location:3363999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTGCAAGTAAAATGTTCACGACCAGCAAGCGCTGCGCCTTTTGCGA
Internal bar code:ATTGTCAGAGAGTAATATTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1472
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCACTACTTTGCCCCC
Suggested primer 2:GGGTGGCGTGTATGGAAGAA