Insertion junction: CLIP2.077766_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077766
Chromosome:chromosome 8
Location:3140756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376200 (1 of 1) IPR000104//IPR013026//IPR019734 - Antifreeze protein, type I // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTCACCACGCCGCCCGAAGCCTTTGGAGAAATCATAGCCAACGGCGA
Internal bar code:TTTCCGAAGCAGTACAACAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1377
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGACCACCCGTACCAGAC
Suggested primer 2:CTCGTGTCCAGGCTGAAGTT