Insertion junction: CLIP2.077772_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077772
Chromosome:chromosome 1
Location:7418484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g052300 E2F1 (1 of 1) K06620 - transcription factor E2F3 (E2F3); Transcription factor, E2F and DP-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAATACTGTCATTTCAATATTACACGGCAAAGTGTCTGGCAAGCCGC
Internal bar code:TGGTGTAGGGAGCAAGGTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2654
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAATCGGTTGCTCCCAG
Suggested primer 2:GCGATTGGTGGGGTACTCAA