Insertion junction: CLIP2.077775_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077775
Chromosome:chromosome 4
Location:309433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800432 FTSHi2,CTAP6,FTSHI2 (1 of 3) IPR000642//IPR003593//IPR003959//IPR027417 - Peptidase M41 // AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; Chloroplast-import FtsH-like ATPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATTATGATGGCTCCATCACCATCACCAGCGCAACAGACCGAGCACTT
Internal bar code:AATGTATCCAAAGTCCGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGAGCGGACCATATGGG
Suggested primer 2:TGCAGCTGCCATGATTCTGA