Insertion junction: CLIP2.077776_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077776
Chromosome:chromosome 14
Location:3207274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628850 CYG26 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTAGGGGCTTGGGGGCTTGGCTTTACACAACACACGGGATGGTCGGA
Internal bar code:TTACGCGGAGACTCACTGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1374
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACCCTCATCCATACGCC
Suggested primer 2:CCGTCTGTGTCTCTGCTGTT