Insertion junction: CLIP2.077778_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077778
Chromosome:chromosome 6
Location:8380044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307800 CYN49 (1 of 1) IPR003609//IPR029000 - PAN/Apple domain // Cyclophilin-like domain; Cyclophilin 49 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGTGGGGCCTGGGAAGTGGGGGCGATGGGACGACAGGGTAAGGGGCG
Internal bar code:GTCTGAATGAAATCGGAATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1149
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGTTTGGCACACACGAC
Suggested primer 2:CACAAACGCGTGTTCGAACT