Insertion junction: CLIP2.077781_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077781
Chromosome:chromosome 17
Location:230577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697406 (1 of 45) IPR029052 - Metallo-dependent phosphatase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAAGCGTCGGCGCCTCCATATGCCGCCCCCACAGGTCTTGACCACCT
Internal bar code:TATTGTGCGCAAGAGGCGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1329
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCTGTGCGGAAGTCGAA
Suggested primer 2:CAAGTCTGGTCTGCCCGATT