Insertion junction: CLIP2.077835_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077835
Chromosome:chromosome 9
Location:3556485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396624 (1 of 1) IPR000104//IPR001841//IPR002110//IPR016024//IPR020683 - Antifreeze protein, type I // Zinc finger, RING-type // Ankyrin repeat // Armadillo-type fold // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCATGCATGCACACAATCCCGCAAAGCCTGGCTCCGCTGCTGAGTACC
Internal bar code:TCAAGGGCGTGTAGTCTTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGGCCAAAAGGGTTGGT
Suggested primer 2:CTAGGTCACCAGGCAATGCA