Insertion junction: CLIP2.077836_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077836
Chromosome:chromosome 7
Location:357434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314650 RECA1,RECA,EZY19 Chloroplast RecA recombination protein; (1 of 1) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGACCGGCCCTGTGGCTGACCGGGTCATTGTCGCGTTTCTGTGGCAC
Internal bar code:CGTAGGAGTAAAATGGAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTTTTGGAAGGGGCAG
Suggested primer 2:CGTACTGTAGCCCCGGAATC