Insertion junction: CLIP2.077841_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077841
Chromosome:chromosome 7
Location:5664233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352600 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCCCAGCACTTGTATCCGCCGCTAGAGCCGATGCAGACCTAAAGGC
Internal bar code:GTCCGCTGGGCTGATTGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAATGTTGACCAGAGC
Suggested primer 2:ATGATGGTGTTGGTGGCGAT