Insertion junction: CLIP2.077849_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077849
Chromosome:chromosome 2
Location:7169949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCTTCCTCTTCTCCTCCTGCGCTAGAATAATCAGCCAATATATCTT
Internal bar code:GAGTGTAGTCCAATACGCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2294
LEAP-Seq percent confirming:89.7959
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGTGTCGTCGTCACTC
Suggested primer 2:CCGTGGAAACCGTAGTCACA