Insertion junction: CLIP2.077851_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077851
Chromosome:chromosome 2
Location:5534743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114900 ANK23 Predicted protein with ankyrin repeats; (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACTCGAACGTGTCACACCAACTTCTGGCTCACAGCAGCCGGCATGGGA
Internal bar code:CGTCTTGTGCCGTTTTAATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1248
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATACGGGCTCACGGAGG
Suggested primer 2:GCTGCTCTTGGGCTTCAAAC