Insertion junction: CLIP2.077859_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077859
Chromosome:chromosome 3
Location:4324091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800330 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTGACCAGATGCGTTGGGCGTCGGGGGAACCGCGTTCCAAGCATCCG
Internal bar code:CGGGTAGCGCCTGTAGTTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3435
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGGTGCTACGAATCCATA
Suggested primer 2:GGGGTCAACAATCACGGTCT