Insertion junction: CLIP2.077861_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077861
Chromosome:chromosome 13
Location:1649068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573700 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) 3'UTR
Cre13.g573750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGTGCTCGGAGCCTGCTTGCTCATTGGTGGTCCTGGTGACCGTCAGA
Internal bar code:TTCGTTTCCATCTATAAAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AAACATTGTTCGCGTGTGGG
Suggested primer 2:GTTGCGGTGCACATATCGTC