Insertion junction: CLIP2.077863_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077863
Chromosome:chromosome 3
Location:1034970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148201 (1 of 10) IPR013781 - Glycoside hydrolase, catalytic domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCCAGCCTTGGCCGGAATGGCCCGTGGGTCAGCCTGCCGCGGCTCCT
Internal bar code:TTCAAATACAACAGCGGTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTTTGGTTGCGCCGAAA
Suggested primer 2:CTACCTGGGCACAAGGAAGG