Insertion junction: CLIP2.077866_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077866
Chromosome:chromosome 12
Location:4531828
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g521200 RFC1 (1 of 1) K10754 - replication factor C subunit 1 (RFC1); DNA replication factor C complex subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCAAGATGCCCTGGCGTTACAGCAGAAGCCGCAAAAAAACCACATT
Internal bar code:AACGTTGACATGTAATGCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:32.5
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCACCCTCCTCTCCTC
Suggested primer 2:CGACATAAGGCTTGCGAACG