Insertion junction: CLIP2.077878_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077878
Chromosome:chromosome 17
Location:2365630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714000 HFO21,HFO19,HFO32,HFO3 (1 of 33) K11254 - histone H4 (H4); Histone H4 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGTGTCGGGCTTGTGCTCCTGGGCCTATTCCGGGCATGTCCTGGCC
Internal bar code:ACATGTTTGTGATCGATCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1180
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGCTTGGCTCAGACTG
Suggested primer 2:ACATCCAGGGCATCACCAAG