Insertion junction: CLIP2.077882_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077882
Chromosome:chromosome 12
Location:697288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492900 (1 of 3) PF01661 - Macro domain (Macro) outside_mRNA
Cre12.g492950 NSG5,DIV15,RIR1 (1 of 1) K10807 - ribonucleoside-diphosphate reductase subunit M1 (RRM1); Ribonucleoside-diphosphate reductase R1 subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATCCTCCACGCCATCAACGTAGAGAGGGCACTTCTTGTCACCCCTG
Internal bar code:CTGCGTGGAATATTAAATCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGTGGACTGTGGGTTTT
Suggested primer 2:GTGTGCGGGTGGTCTTTTTC