Insertion junction: CLIP2.077883_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077883
Chromosome:chromosome 1
Location:2435890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014100 (1 of 1) PTHR14614//PTHR14614:SF29 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // PROTEIN FAM86A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACAGCTCTTCGCTCCTGCCCCACACGCTCACCCTCACGAGCACGGC
Internal bar code:ATCGAGCTGGTTGTGATTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2641
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGTGTGATGGGGACTG
Suggested primer 2:GCTCGACATTGCTTAGTGCG