Insertion junction: CLIP2.077884_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077884
Chromosome:plastome
Location:160137
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802323 2717034,atpB,ChreCp058 (1 of 1) K02112 - F-type H+-transporting ATPase subunit beta (ATPF1B, atpD); ATPase beta chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTTTCATTTCTGTGTAAAGGTCGTTACCTTCACGTGTACGTTCACCA
Internal bar code:CATTTGACGTCATTGGTATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:53
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGAAGGAGGAGGTTCTT
Suggested primer 2:GCAGGAGCAGGGTCAGTAAG