Insertion junction: CLIP2.077893_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077893
Chromosome:chromosome 2
Location:1138449
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g080850 CYN47,CYN11 Cyclophilin 47; (1 of 1) IPR003582//IPR029000 - ShKT domain // Cyclophilin-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCTCAGCCCAGTCGCTGCAGGCCGACTCCGCATCGCGGCAGGCCTTG
Internal bar code:CCATCCGCATTTGGGGACTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTGGAAATGAGGAAGGA
Suggested primer 2:TTGATGCGGATCTGACGAGG