Insertion junction: CLIP2.077902_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077902
Chromosome:chromosome 12
Location:9778528
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g549852 (1 of 14) IPR002198//IPR002347 - Short-chain dehydrogenase/reductase SDR // Glucose/ribitol dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCGCTGTTCACCTTGCGGCTGGTTGCGATGACCACGTTGTCTCGCGC
Internal bar code:AGCTCAAGTCGAGTTTTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGTGTGGTGAACATGC
Suggested primer 2:CTTCACAGCCACCATGTTGC