Insertion junction: CLIP2.077904_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077904
Chromosome:chromosome 5
Location:2718296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240400 SOM2 (1 of 2) PTHR11746//PTHR11746:SF104 - O-METHYLTRANSFERASE // O-METHYLTRANSFERASE 10; S-adenosyl-L-methionine-dependent O-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGACCAAATGCAATAGGGCGAGGAGGAGAGCGCAGGGGGGAGGGGGT
Internal bar code:GTAAACTTCTTGTGCCGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1402
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTGTTCAAGCCGTGTT
Suggested primer 2:GCGCCTTCGACTACAGCTAT