Insertion junction: CLIP2.077905_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077905
Chromosome:chromosome 17
Location:3226543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721600 (1 of 1) K12847 - U4/U6.U5 tri-snRNP-associated protein 2 (USP39, SAD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACCCGCCCCCCGCCTGATGCCCTAAGCCCGCTCGTTGCTGTTTACAC
Internal bar code:GTTTCCTACAATCGTGCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1112
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGGGAGAGGGTTGAAGC
Suggested primer 2:GTTTGGGAACGTGACAAGGC