Insertion junction: CLIP2.077906_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077906
Chromosome:chromosome 5
Location:2505936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800561 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGCCGGCCCACAGCCGTACGGCGTGCGCAGGGTGCTGGTGGCTGTGC
Internal bar code:CGTTAAGAGGCTATGCTGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3560
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGTAGGGGTCAAGGTC
Suggested primer 2:TGCGGTGAGTTGTTTGCATG