Insertion junction: CLIP2.077920_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077920
Chromosome:chromosome 1
Location:4308602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029250 AAH1 Aromatic amino acid hydroxylase-related protein; (1 of 1) PF00351 - Biopterin-dependent aromatic amino acid hydroxylase (Biopterin_H) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAAGCGCGATATTGCCGTGTGAAGACTCGTATGTCCCGCCCAAACAA
Internal bar code:TCTTAATTTATGTCACTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3348
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGGAATGCCGGGAGTCT
Suggested primer 2:CACTGGACGCACTCTCTGTT