Insertion junction: CLIP2.077926_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077926
Chromosome:chromosome 1
Location:1331436
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g800023 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTTGTTGTAACAGCGGCCAGCAGGTGCGAAAGGCGAGGAACAGCAGT
Internal bar code:GGGTTGAAATATGCGATCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTGTGCTTTGGGTTCGC
Suggested primer 2:GTGTGTCGTGGGTAAGAGCA