Insertion junction: CLIP2.077945_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077945
Chromosome:chromosome 8
Location:1305546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363950 (1 of 2) PF07819 - PGAP1-like protein (PGAP1); Putative Glucan Water Dikinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCAGCACCGTTTTCCCGACACCGTGGCATCGTGGGCGCGTTGATAC
Internal bar code:ATCTACTTACGAGGGCTATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1897
LEAP-Seq percent confirming:93.4783
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TATAAGCGCGCCCATGATGT
Suggested primer 2:GTGTCCGCGTAAACAGGAGA