Insertion junction: CLIP2.077957_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077957
Chromosome:plastome
Location:86471
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802299 rps2,ChreCp034,2717005 30S ribosomal protein S2; (1 of 1) PTHR12534:SF0 - 28S RIBOSOMAL PROTEIN S2, MITOCHONDRIAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGCCATTTCTTTTTACGAGAAGCGGCTACTTTTTTAGATTGTCTACT
Internal bar code:CACCCTGCCTATGGTTTCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:23.8095
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCGTTAAATAAAGTTCTTGCT
Suggested primer 2:CCCCTTCGGGCAAGTAAACT