Insertion junction: CLIP2.077959_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077959
Chromosome:chromosome 9
Location:5221809
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g801069 Putative metallochaperone; (1 of 1) IPR002395//IPR003495//IPR011629//IPR027417 - HMW kininogen // CobW/HypB/UreG domain // Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACGGGGCGTCGGCGGCAGCGGCTGAGGCGGCGTTGGCGGCAGCGGC
Internal bar code:GGGAGTTCGTATTTTCAGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:133
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGACGACGACACGGTCAT
Suggested primer 2:TGATGCAGGCGTGTGTTTTG