Insertion junction: CLIP2.077960_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077960
Chromosome:chromosome 9
Location:66072
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g386161 (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTGGCCTCAGACTGTGGCGGGGCTCAGCCCCTTTTCCCGTGACCGGG
Internal bar code:GATCCTGTATGAGTTGGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:848
LEAP-Seq percent confirming:27.4194
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGGATGCCCTAGGATGC
Suggested primer 2:ACTCACTCTACCCTCCCGAC