Insertion junction: CLIP2.077979_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077979
Chromosome:chromosome 15
Location:1849018
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g141706 ERA1 Putative chloroplast 16S rRNA processing factor; (1 of 1) K03595 - GTP-binding protein Era (era) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGTTAGCCACGGATGACAAGAACACGACTAAAGAGCCGTGCGGTCC
Internal bar code:CTCGACTATGGATGCCCAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCAAGTCAAACCGTTGC
Suggested primer 2:TTGCAAGGGGTTGGGAACTT