Insertion junction: CLIP2.077987_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077987
Chromosome:chromosome 10
Location:6231955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463150 DCI1 Enoyl-CoA hydratase/isomerase family; (1 of 1) PTHR11941//PTHR11941:SF43 - ENOYL-COA HYDRATASE-RELATED // DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIAL 5'UTR
Cre10.g463200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCATCTTTCAAGTCCATGCTGTAGGCCTACCAGAAACACAACTTGAC
Internal bar code:GCTGGTCAGCAACAAGCATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1117
LEAP-Seq percent confirming:87.2727
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCACAGGTTCGGTTTG
Suggested primer 2:GGTTTGGAGTCGAGCTGGAA