Insertion junction: CLIP2.077987_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077987
Chromosome:chromosome 10
Location:6231976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463150 DCI1 Enoyl-CoA hydratase/isomerase family; (1 of 1) PTHR11941//PTHR11941:SF43 - ENOYL-COA HYDRATASE-RELATED // DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIAL 5'UTR
Cre10.g463200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCAGCACGCACGGCGCGTGCCGCGTCAGATGACGCATTTGTCTGTGC
Internal bar code:TAGGAGAAACGCGTCTGAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:37.2093
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTGGAGTCGAGCTGGAA
Suggested primer 2:CACTGCACAGGTTCGGTTTG