Insertion junction: CLIP2.077995_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077995
Chromosome:chromosome 6
Location:965480
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g256500 (1 of 2) PTHR14187//PTHR14187:SF5 - ALPHA KINASE/ELONGATION FACTOR 2 KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATACGAGCGGTTCGGGTTTGGGCCTGCACTGGGAACGAAGAATGCGT
Internal bar code:GGTGGAGGAGGAGGGTAGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2456
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACGCATTGTGGCCAAGA
Suggested primer 2:TGTGCATTTGATTGTGCGGG