Insertion junction: CLIP2.078002_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078002
Chromosome:chromosome 2
Location:8136042
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g144000 IND1 (1 of 1) PTHR10584//PTHR10584:SF201 - SUGAR KINASE // INDIGOIDINE SYNTHASE A-LIKE PROTEIN; Indigoidine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCACTGCCAGCAGCATGCCACTGCCCAGGCCCAGCCGCCGCACACAGC
Internal bar code:CAGGTTGTTACGTTTTGGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGCATCGCTGATTCAG
Suggested primer 2:GCCGACTATGCAGCCATTTG