Insertion junction: CLIP2.078003_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078003
Chromosome:plastome
Location:61271
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802289 ChreCp025,rps14,2716974 (1 of 1) K02954 - small subunit ribosomal protein S14 (RP-S14, MRPS14, rpsN); 30S ribosomal protein S14 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAATAAATAAATTTGTTGCCTCGCCTATCGGCTAACAAGTTCCTTCG
Internal bar code:TTTCAGACGATCTTAATTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:29.0323
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAACATTCTCCTTCCGA
Suggested primer 2:TAGCGCTTAGACGAGGACCT