Insertion junction: CLIP2.078006_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078006
Chromosome:chromosome 7
Location:5594887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800857 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGTGAGAACACAACGTGCTGTCAAGCTCAGCGAGATACGCCAATTTT
Internal bar code:ATATGCTACTGGGGCGGAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4397
LEAP-Seq percent confirming:74.6032
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCAAGAAAGCGTTCCGT
Suggested primer 2:GAGTCGGGCATGAGATGAGG