Insertion junction: CLIP2.078012_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078012
Chromosome:chromosome 3
Location:5031886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179901 mL116,OPR131,MRPL116 mitochondrial ribosome protein mL116, Chlamydomonas-specific 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTATGCCCCACCCCGCCGCCCCTGCCACACTCTGCCTCCTGTGGCCC
Internal bar code:AACCTCGGCGCCGTTCTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1037
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCATACACCTTACCGCC
Suggested primer 2:CTCGCCTGGGGAAAGTGAAT