Insertion junction: CLIP2.078015_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078015
Chromosome:chromosome 17
Location:2172450
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g712300 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCTGGTGCTGGCCAGCCGCGACGCCGTGTTCGCCATGCAGGCCCTGG
Internal bar code:ATATAAGACAAATGGTCTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:912
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCTTGCAAACCAAACGA
Suggested primer 2:GTAGGGGAAAGGGATGGTGC