Insertion junction: CLIP2.078016_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078016
Chromosome:chromosome 14
Location:4062735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633500 (1 of 1) IPR024224 - DENND6 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGACGGGCTGGCCGTAGCTGCTTAAAAGCTATCTGCAGCGAGCGCGC
Internal bar code:CTGCTGGTGTTGGTGTATCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTCCCCTTACGAGTTG
Suggested primer 2:GCGACTTCCCCTCAATCACA