Insertion junction: CLIP2.078020_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078020
Chromosome:chromosome 8
Location:3877192
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTGTGTCCCAAACTTTAATCTGCGTATGTGAACTGCATGCCGCGCCT
Internal bar code:CAAGGTTCGGGACTTTTGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:597
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTATGAGCAGCTCTCCCG
Suggested primer 2:CGGAGAGGGTTCACGTTGAA