Insertion junction: CLIP2.078023_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078023
Chromosome:chromosome 8
Location:3615842
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g379700 PHM1 (1 of 1) 5.4.2.3 - Phosphoacetylglucosamine mutase / N-acetylglucosamine-phosphate mutase; Phosphoacetylglucosamine/phosphohexo mutase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCGGCTGACGGCGGCGGTGAGGATCAGCAGCGAGGGGACGGGCAGGA
Internal bar code:TTTTTGTCAGATGCTCAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:185
LEAP-Seq percent confirming:8.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCACGCACCTGAGTATG
Suggested primer 2:CCCACTCCACGTTACGAACA