Insertion junction: CLIP2.078030_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078030
Chromosome:chromosome 2
Location:5810406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117050 (1 of 2) IPR000014//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - PAS domain // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like; Protein tyrosine kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCTTTGCGGCCCGCCGCCTGCCACCTGTGTGAAAGCATGGTTGGCAT
Internal bar code:GTCTGATGTTGGCTGTCTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCAGTCAACACGGGTGA
Suggested primer 2:AAACTGCCCTTGCTTGCATG