Insertion junction: CLIP2.078034_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078034
Chromosome:chromosome 9
Location:5885345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411950 (1 of 3) IPR001005//IPR009057//IPR017877//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb-like domain // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGTCGGAACTGGCAACACTCCTTGTGCGTGTGACCCATATGTACTGT
Internal bar code:TATCACAGTATCTAGCTGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2629
LEAP-Seq percent confirming:73.8095
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTAGCACTCGCATCTACA
Suggested primer 2:GATTTGCCCCCACACAGAGA