Insertion junction: CLIP2.078038_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078038
Chromosome:chromosome 4
Location:3831508
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g229850 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCACAAGGAATCCGTTCCCCAGTCCCACATTTGCCGATGCGAGCCCG
Internal bar code:CAAAAGGCTTTATTGCATCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGAGATGGAGAGGAGCA
Suggested primer 2:CAGCAGTCAAGTCCCCATGT