Insertion junction: CLIP2.078039_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078039
Chromosome:chromosome 12
Location:7619320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555750 CPK7 (1 of 13) PTHR10584 - SUGAR KINASE; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTTTGATCTTGAGAGTCAAGCTTTGAGTGCGGCGTGGGTGTAGGCTG
Internal bar code:TGTGATGGCGAGCTTCTCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3666
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAGTCCTTGACCAGCAT
Suggested primer 2:CGTGGCTACTGTGACCTTGT