Insertion junction: CLIP2.078047_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078047
Chromosome:chromosome 14
Location:1799638
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g619500 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Internal bar code:ACTTATCTCCATCCCTCTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCATCAACGTCCAGCA
Suggested primer 2:ACATGGGCATGCTCTCAGTC