Insertion junction: CLIP2.078050_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078050
Chromosome:chromosome 4
Location:3017175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225050 (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTTGTTCGGCAACTGCAGTAATGGAAGCAGAAGCTGCATGGGGCATG
Internal bar code:ACTATAGCGTGAGTGGCTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2286
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGAGTGTGGCGTTCATC
Suggested primer 2:GCTGAGAGCTGGGGAATGTT