Insertion junction: CLIP2.078050_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078050
Chromosome:chromosome 4
Location:3017179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225050 (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACATATATAAGCGTTATATAATACAACGTTTCCAGCAACACACAAGA
Internal bar code:ACTATAGCGTGAGTGGCTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAGAGCTGGGGAATGTT
Suggested primer 2:TCAGGAGTGTGGCGTTCATC